Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim6Q8BGE7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim6Q8BGE7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Gm12382-201ENSMUST00000122005 922 ntBASIC17.68■□□□□ 0.42
Trim6Q8BGE7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim6Q8BGE7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim6Q8BGE7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim6Q8BGE7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim6Q8BGE7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms