Protein–RNA interactions for Protein: Q80UY2

Kcmf1, E3 ubiquitin-protein ligase KCMF1, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcmf1Q80UY2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Kcmf1Q80UY2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Gm10013-201ENSMUST00000106074 672 ntBASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Gm44450-201ENSMUST00000199528 114 ntBASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Kcmf1Q80UY2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Kcmf1Q80UY2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Gm11336-201ENSMUST00000118168 334 ntBASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Kcmf1Q80UY2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Kcmf1Q80UY2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Kcmf1Q80UY2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Kcmf1Q80UY2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Kcmf1Q80UY2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Kcmf1Q80UY2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Kcmf1Q80UY2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms