Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Gm11336-201ENSMUST00000118168 334 ntBASIC5.66□□□□□ -1.5
Syne1Q6ZWR6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Syne1Q6ZWR6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Syne1Q6ZWR6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Syne1Q6ZWR6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Syne1Q6ZWR6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Syne1Q6ZWR6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Syne1Q6ZWR6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Syne1Q6ZWR6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Syne1Q6ZWR6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Syne1Q6ZWR6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC5.66□□□□□ -1.5
Syne1Q6ZWR6 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Syne1Q6ZWR6 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 AC124569.2-201ENSMUST00000225998 818 ntBASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Gm27867-201ENSMUST00000184778 125 ntBASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Syne1Q6ZWR6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Gm29791-202ENSMUST00000207888 369 ntBASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Syne1Q6ZWR6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Gm6296-201ENSMUST00000222599 943 ntBASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Cmtm5-203ENSMUST00000227441 610 ntBASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
Syne1Q6ZWR6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms