Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nup188Q6ZQH8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.7■□□□□ 0.74
Nup188Q6ZQH8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Nup188Q6ZQH8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup188Q6ZQH8 Gm37500-201ENSMUST00000192059 1443 ntBASIC19.69■□□□□ 0.74
Nup188Q6ZQH8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup188Q6ZQH8 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup188Q6ZQH8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup188Q6ZQH8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.69■□□□□ 0.74
Nup188Q6ZQH8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup188Q6ZQH8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Nup188Q6ZQH8 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.69■□□□□ 0.74
Nup188Q6ZQH8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup188Q6ZQH8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup188Q6ZQH8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Gm7222-201ENSMUST00000117512 906 ntBASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Gm5682-201ENSMUST00000173402 505 ntBASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup188Q6ZQH8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup188Q6ZQH8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nup188Q6ZQH8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nup188Q6ZQH8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms