Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Npc1l1Q6T3U4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Gm27459-201ENSMUST00000184860 107 ntBASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Gm5864-201ENSMUST00000202263 970 ntBASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1l1Q6T3U4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Gm28659-201ENSMUST00000188013 759 ntBASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1l1Q6T3U4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1l1Q6T3U4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Gm12895-201ENSMUST00000122214 226 ntBASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1l1Q6T3U4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1l1Q6T3U4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms