Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rif1Q6PR54 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Mir449b-201ENSMUST00000104833 80 ntBASIC13.98□□□□□ -0.17
Rif1Q6PR54 Mir1938-201ENSMUST00000158746 100 ntBASIC13.98□□□□□ -0.17
Rif1Q6PR54 Gm44430-201ENSMUST00000203376 995 ntBASIC13.98□□□□□ -0.17
Rif1Q6PR54 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.98□□□□□ -0.17
Rif1Q6PR54 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.98□□□□□ -0.17
Rif1Q6PR54 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rif1Q6PR54 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.97□□□□□ -0.17
Rif1Q6PR54 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Rif1Q6PR54 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rif1Q6PR54 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Gm9899-201ENSMUST00000065519 555 ntBASIC13.97□□□□□ -0.17
Rif1Q6PR54 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rif1Q6PR54 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rif1Q6PR54 Tgds-204ENSMUST00000228543 1594 ntBASIC13.96□□□□□ -0.17
Rif1Q6PR54 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.96□□□□□ -0.17
Rif1Q6PR54 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Golph3-202ENSMUST00000226517 2359 ntBASIC13.96□□□□□ -0.17
Rif1Q6PR54 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Mir7085-201ENSMUST00000184353 66 ntBASIC13.96□□□□□ -0.17
Rif1Q6PR54 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rif1Q6PR54 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
Rif1Q6PR54 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Rif1Q6PR54 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rif1Q6PR54 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.95□□□□□ -0.18
Rif1Q6PR54 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rif1Q6PR54 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.95□□□□□ -0.18
Rif1Q6PR54 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Phf7-203ENSMUST00000226565 1971 ntBASIC13.95□□□□□ -0.18
Rif1Q6PR54 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rif1Q6PR54 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.94□□□□□ -0.18
Rif1Q6PR54 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms