Protein–RNA interactions for Protein: Q6P9P0

Slf2, SMC5-SMC6 complex localization factor protein 2, mousemouse

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf2Q6P9P0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Gm25745-201ENSMUST00000174945 133 ntBASIC20.52■□□□□ 0.88
Slf2Q6P9P0 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.52■□□□□ 0.88
Slf2Q6P9P0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slf2Q6P9P0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slf2Q6P9P0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Slf2Q6P9P0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Slf2Q6P9P0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.51■□□□□ 0.87
Slf2Q6P9P0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.51■□□□□ 0.87
Slf2Q6P9P0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.51■□□□□ 0.87
Slf2Q6P9P0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slf2Q6P9P0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.51■□□□□ 0.87
Slf2Q6P9P0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slf2Q6P9P0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slf2Q6P9P0 Gm37935-201ENSMUST00000192012 982 ntBASIC20.51■□□□□ 0.87
Slf2Q6P9P0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC20.51■□□□□ 0.87
Slf2Q6P9P0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slf2Q6P9P0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
Slf2Q6P9P0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slf2Q6P9P0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Gm12350-201ENSMUST00000121208 462 ntBASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slf2Q6P9P0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slf2Q6P9P0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Gm25925-201ENSMUST00000158314 306 ntBASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.48■□□□□ 0.87
Slf2Q6P9P0 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slf2Q6P9P0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms