Protein–RNA interactions for Protein: Q6P8X6

Usp50, Putative ubiquitin carboxyl-terminal hydrolase 50, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp50Q6P8X6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp50Q6P8X6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.16■□□□□ 0.66
Usp50Q6P8X6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp50Q6P8X6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp50Q6P8X6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Usp50Q6P8X6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp50Q6P8X6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.16■□□□□ 0.66
Usp50Q6P8X6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp50Q6P8X6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp50Q6P8X6 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Usp50Q6P8X6 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp50Q6P8X6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp50Q6P8X6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp50Q6P8X6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.15■□□□□ 0.66
Usp50Q6P8X6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp50Q6P8X6 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp50Q6P8X6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp50Q6P8X6 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.15■□□□□ 0.66
Usp50Q6P8X6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp50Q6P8X6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Usp50Q6P8X6 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Usp50Q6P8X6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
Usp50Q6P8X6 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Gm27357-201ENSMUST00000183754 135 ntBASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp50Q6P8X6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Usp50Q6P8X6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 Gm18669-201ENSMUST00000216049 778 ntBASIC19.12■□□□□ 0.65
Usp50Q6P8X6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Usp50Q6P8X6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp50Q6P8X6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp50Q6P8X6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp50Q6P8X6 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp50Q6P8X6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp50Q6P8X6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp50Q6P8X6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp50Q6P8X6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp50Q6P8X6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp50Q6P8X6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Usp50Q6P8X6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp50Q6P8X6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Usp50Q6P8X6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.11■□□□□ 0.65
Usp50Q6P8X6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Usp50Q6P8X6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp50Q6P8X6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp50Q6P8X6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Usp50Q6P8X6 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.1■□□□□ 0.65
Usp50Q6P8X6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Usp50Q6P8X6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp50Q6P8X6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Usp50Q6P8X6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.1■□□□□ 0.65
Usp50Q6P8X6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Usp50Q6P8X6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp50Q6P8X6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.1■□□□□ 0.65
Usp50Q6P8X6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Usp50Q6P8X6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms