Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctr9Q62018 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctr9Q62018 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctr9Q62018 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ctr9Q62018 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.58■□□□□ 0.73
Ctr9Q62018 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ctr9Q62018 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Ctr9Q62018 Gm9103-201ENSMUST00000119371 405 ntBASIC19.58■□□□□ 0.72
Ctr9Q62018 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.58■□□□□ 0.72
Ctr9Q62018 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ctr9Q62018 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.58■□□□□ 0.72
Ctr9Q62018 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ctr9Q62018 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ctr9Q62018 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ctr9Q62018 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ctr9Q62018 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.58■□□□□ 0.72
Ctr9Q62018 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ctr9Q62018 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.57■□□□□ 0.72
Ctr9Q62018 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ctr9Q62018 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ctr9Q62018 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.56■□□□□ 0.72
Ctr9Q62018 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ctr9Q62018 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ctr9Q62018 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ctr9Q62018 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ctr9Q62018 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.56■□□□□ 0.72
Ctr9Q62018 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ctr9Q62018 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ctr9Q62018 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.56■□□□□ 0.72
Ctr9Q62018 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.56■□□□□ 0.72
Ctr9Q62018 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ctr9Q62018 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ctr9Q62018 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ctr9Q62018 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ctr9Q62018 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ctr9Q62018 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ctr9Q62018 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ctr9Q62018 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Ctr9Q62018 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.55■□□□□ 0.72
Ctr9Q62018 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Gm17807-201ENSMUST00000186869 298 ntBASIC19.55■□□□□ 0.72
Ctr9Q62018 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ctr9Q62018 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ctr9Q62018 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ctr9Q62018 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ctr9Q62018 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ctr9Q62018 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ctr9Q62018 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ctr9Q62018 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.54■□□□□ 0.72
Ctr9Q62018 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.54■□□□□ 0.72
Ctr9Q62018 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ctr9Q62018 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ctr9Q62018 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ctr9Q62018 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.54■□□□□ 0.72
Ctr9Q62018 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ctr9Q62018 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ctr9Q62018 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ctr9Q62018 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ctr9Q62018 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Ctr9Q62018 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ctr9Q62018 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.53■□□□□ 0.72
Ctr9Q62018 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ctr9Q62018 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms