Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six4Q61321 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.79■□□□□ 0.28
Six4Q61321 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six4Q61321 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six4Q61321 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Six4Q61321 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six4Q61321 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.78■□□□□ 0.28
Six4Q61321 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Six4Q61321 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Six4Q61321 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six4Q61321 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.78■□□□□ 0.28
Six4Q61321 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.78■□□□□ 0.28
Six4Q61321 Gm6345-202ENSMUST00000180900 204 ntBASIC16.78■□□□□ 0.28
Six4Q61321 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.78■□□□□ 0.28
Six4Q61321 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six4Q61321 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.78■□□□□ 0.28
Six4Q61321 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six4Q61321 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Six4Q61321 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six4Q61321 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six4Q61321 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six4Q61321 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Six4Q61321 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six4Q61321 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Six4Q61321 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Six4Q61321 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Mir770-201ENSMUST00000103252 94 ntBASIC16.77■□□□□ 0.28
Six4Q61321 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.77■□□□□ 0.28
Six4Q61321 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.77■□□□□ 0.28
Six4Q61321 Gm29707-201ENSMUST00000196325 491 ntBASIC16.77■□□□□ 0.28
Six4Q61321 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.77■□□□□ 0.28
Six4Q61321 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six4Q61321 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Six4Q61321 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Six4Q61321 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Six4Q61321 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Six4Q61321 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Six4Q61321 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Six4Q61321 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Six4Q61321 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Gm9013-201ENSMUST00000132939 882 ntBASIC16.76■□□□□ 0.27
Six4Q61321 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Gm5587-201ENSMUST00000206270 674 ntBASIC16.76■□□□□ 0.27
Six4Q61321 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.76■□□□□ 0.27
Six4Q61321 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Six4Q61321 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Six4Q61321 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Six4Q61321 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six4Q61321 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six4Q61321 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six4Q61321 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six4Q61321 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Six4Q61321 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six4Q61321 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six4Q61321 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Six4Q61321 AA414768-201ENSMUST00000121924 1257 ntBASIC16.75■□□□□ 0.27
Six4Q61321 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Six4Q61321 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six4Q61321 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms