Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.28□□□□□ -0.12
Clns1aQ61189 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Clns1aQ61189 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Clns1aQ61189 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.28□□□□□ -0.12
Clns1aQ61189 Gm7291-201ENSMUST00000199147 382 ntBASIC14.28□□□□□ -0.12
Clns1aQ61189 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Clns1aQ61189 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Clns1aQ61189 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Clns1aQ61189 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clns1aQ61189 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clns1aQ61189 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
Clns1aQ61189 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Clns1aQ61189 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clns1aQ61189 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Clns1aQ61189 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clns1aQ61189 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Clns1aQ61189 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Clns1aQ61189 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clns1aQ61189 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clns1aQ61189 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clns1aQ61189 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.27□□□□□ -0.12
Clns1aQ61189 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clns1aQ61189 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clns1aQ61189 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clns1aQ61189 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Clns1aQ61189 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clns1aQ61189 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.27□□□□□ -0.13
Clns1aQ61189 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.27□□□□□ -0.13
Clns1aQ61189 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.27□□□□□ -0.13
Clns1aQ61189 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.27□□□□□ -0.13
Clns1aQ61189 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.27□□□□□ -0.13
Clns1aQ61189 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clns1aQ61189 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clns1aQ61189 Gm6365-201ENSMUST00000054711 744 ntBASIC14.27□□□□□ -0.13
Clns1aQ61189 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clns1aQ61189 Gm10493-201ENSMUST00000097270 612 ntBASIC14.27□□□□□ -0.13
Clns1aQ61189 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clns1aQ61189 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Clns1aQ61189 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Clns1aQ61189 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clns1aQ61189 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Clns1aQ61189 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clns1aQ61189 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clns1aQ61189 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clns1aQ61189 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clns1aQ61189 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Clns1aQ61189 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.26□□□□□ -0.13
Clns1aQ61189 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
Clns1aQ61189 Gm11643-201ENSMUST00000119578 864 ntBASIC14.26□□□□□ -0.13
Clns1aQ61189 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Clns1aQ61189 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.26□□□□□ -0.13
Clns1aQ61189 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC14.26□□□□□ -0.13
Clns1aQ61189 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.26□□□□□ -0.13
Clns1aQ61189 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Clns1aQ61189 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Clns1aQ61189 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clns1aQ61189 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Clns1aQ61189 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clns1aQ61189 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Clns1aQ61189 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Clns1aQ61189 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms