Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Satb1Q60611 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Satb1Q60611 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Satb1Q60611 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Satb1Q60611 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Satb1Q60611 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Satb1Q60611 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.2■□□□□ 0.34
Satb1Q60611 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Satb1Q60611 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Satb1Q60611 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.2■□□□□ 0.34
Satb1Q60611 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Satb1Q60611 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Satb1Q60611 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Satb1Q60611 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Satb1Q60611 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.19■□□□□ 0.34
Satb1Q60611 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Satb1Q60611 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Satb1Q60611 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Satb1Q60611 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.19■□□□□ 0.34
Satb1Q60611 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.19■□□□□ 0.34
Satb1Q60611 Gm10576-201ENSMUST00000191927 825 ntBASIC17.19■□□□□ 0.34
Satb1Q60611 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.19■□□□□ 0.34
Satb1Q60611 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.19■□□□□ 0.34
Satb1Q60611 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Satb1Q60611 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Satb1Q60611 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Satb1Q60611 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Satb1Q60611 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Satb1Q60611 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Satb1Q60611 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Satb1Q60611 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Satb1Q60611 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Satb1Q60611 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Satb1Q60611 Gm43575-201ENSMUST00000196420 516 ntBASIC17.18■□□□□ 0.34
Satb1Q60611 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.18■□□□□ 0.34
Satb1Q60611 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Satb1Q60611 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Satb1Q60611 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Satb1Q60611 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Satb1Q60611 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.17■□□□□ 0.34
Satb1Q60611 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Satb1Q60611 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Satb1Q60611 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Satb1Q60611 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.17■□□□□ 0.34
Satb1Q60611 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.17■□□□□ 0.34
Satb1Q60611 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Satb1Q60611 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.17■□□□□ 0.34
Satb1Q60611 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Satb1Q60611 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.17■□□□□ 0.34
Satb1Q60611 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Satb1Q60611 Rps4l-201ENSMUST00000071745 943 ntBASIC17.17■□□□□ 0.34
Satb1Q60611 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Satb1Q60611 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Satb1Q60611 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.17■□□□□ 0.34
Satb1Q60611 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Satb1Q60611 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.16■□□□□ 0.34
Satb1Q60611 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.16■□□□□ 0.34
Satb1Q60611 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Satb1Q60611 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.16■□□□□ 0.34
Satb1Q60611 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Satb1Q60611 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.16■□□□□ 0.34
Satb1Q60611 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Satb1Q60611 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Satb1Q60611 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Satb1Q60611 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Satb1Q60611 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Satb1Q60611 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Satb1Q60611 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Satb1Q60611 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Satb1Q60611 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Satb1Q60611 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Satb1Q60611 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Satb1Q60611 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
Satb1Q60611 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Satb1Q60611 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Satb1Q60611 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Satb1Q60611 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Satb1Q60611 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Satb1Q60611 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Satb1Q60611 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Satb1Q60611 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Satb1Q60611 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Satb1Q60611 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Satb1Q60611 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms