Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.27□□□□□ -0.28
Trav2Q5R1I9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav2Q5R1I9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav2Q5R1I9 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav2Q5R1I9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Phf7-203ENSMUST00000226565 1971 ntBASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Trav2Q5R1I9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Gm9103-201ENSMUST00000119371 405 ntBASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Ank2-226ENSMUST00000189368 339 ntBASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav2Q5R1I9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav2Q5R1I9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms