Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav6-2Q5R1I4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-2Q5R1I4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-2Q5R1I4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-2Q5R1I4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trav6-2Q5R1I4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-2Q5R1I4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-2Q5R1I4 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-2Q5R1I4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav6-2Q5R1I4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Gm44454-201ENSMUST00000198541 138 ntBASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Rps4l-201ENSMUST00000071745 943 ntBASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-2Q5R1I4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-2Q5R1I4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms