Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Gm5364-201ENSMUST00000216789 889 ntBASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx49Q4FZF3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ddx49Q4FZF3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx49Q4FZF3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.27■□□□□ 0.68
Ddx49Q4FZF3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.27■□□□□ 0.68
Ddx49Q4FZF3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.27■□□□□ 0.68
Ddx49Q4FZF3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC19.27■□□□□ 0.68
Ddx49Q4FZF3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.27■□□□□ 0.68
Ddx49Q4FZF3 Gm2213-201ENSMUST00000197485 688 ntBASIC19.27■□□□□ 0.68
Ddx49Q4FZF3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Ddx49Q4FZF3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx49Q4FZF3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx49Q4FZF3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx49Q4FZF3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx49Q4FZF3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ddx49Q4FZF3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ddx49Q4FZF3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx49Q4FZF3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms