Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim80Q3V061 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim80Q3V061 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Trim80Q3V061 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.22■□□□□ 0.35
Trim80Q3V061 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trim80Q3V061 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.22■□□□□ 0.35
Trim80Q3V061 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.22■□□□□ 0.35
Trim80Q3V061 Gm29791-202ENSMUST00000207888 369 ntBASIC17.22■□□□□ 0.35
Trim80Q3V061 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trim80Q3V061 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim80Q3V061 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Trim80Q3V061 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim80Q3V061 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim80Q3V061 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim80Q3V061 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim80Q3V061 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim80Q3V061 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim80Q3V061 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim80Q3V061 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Trim80Q3V061 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Trim80Q3V061 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim80Q3V061 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim80Q3V061 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trim80Q3V061 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim80Q3V061 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Trim80Q3V061 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trim80Q3V061 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.21■□□□□ 0.35
Trim80Q3V061 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim80Q3V061 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim80Q3V061 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim80Q3V061 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim80Q3V061 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim80Q3V061 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trim80Q3V061 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Trim80Q3V061 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim80Q3V061 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim80Q3V061 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim80Q3V061 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim80Q3V061 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Trim80Q3V061 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim80Q3V061 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim80Q3V061 Gm15565-201ENSMUST00000118890 427 ntBASIC17.2■□□□□ 0.34
Trim80Q3V061 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim80Q3V061 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim80Q3V061 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.2■□□□□ 0.34
Trim80Q3V061 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim80Q3V061 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim80Q3V061 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.2■□□□□ 0.34
Trim80Q3V061 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.2■□□□□ 0.34
Trim80Q3V061 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim80Q3V061 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.19■□□□□ 0.34
Trim80Q3V061 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trim80Q3V061 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim80Q3V061 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim80Q3V061 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim80Q3V061 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim80Q3V061 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim80Q3V061 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim80Q3V061 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.18■□□□□ 0.34
Trim80Q3V061 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Trim80Q3V061 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim80Q3V061 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim80Q3V061 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim80Q3V061 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim80Q3V061 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms