Protein–RNA interactions for Protein: Q3UV55

Nr1d1, Nuclear receptor subfamily 1 group D member 1, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1d1Q3UV55 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 Gm13401-201ENSMUST00000117074 291 ntBASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 Gm15378-201ENSMUST00000121894 207 ntBASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nr1d1Q3UV55 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1d1Q3UV55 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1d1Q3UV55 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.58■□□□□ 0.41
Nr1d1Q3UV55 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1d1Q3UV55 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1d1Q3UV55 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1d1Q3UV55 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1d1Q3UV55 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nr1d1Q3UV55 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Nr1d1Q3UV55 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.58■□□□□ 0.4
Nr1d1Q3UV55 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.58■□□□□ 0.4
Nr1d1Q3UV55 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.58■□□□□ 0.4
Nr1d1Q3UV55 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1d1Q3UV55 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Nr1d1Q3UV55 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1d1Q3UV55 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1d1Q3UV55 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1d1Q3UV55 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.58■□□□□ 0.4
Nr1d1Q3UV55 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
Nr1d1Q3UV55 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1d1Q3UV55 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nr1d1Q3UV55 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 Mir1199-201ENSMUST00000117015 119 ntBASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nr1d1Q3UV55 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Gm11643-201ENSMUST00000119578 864 ntBASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Nr1d1Q3UV55 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nr1d1Q3UV55 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms