Protein–RNA interactions for Protein: Q3ULW6

Ccdc33, Coiled-coil domain-containing protein 33, mousemouse

Predictions only

Length 985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc33Q3ULW6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc33Q3ULW6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc33Q3ULW6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc33Q3ULW6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc33Q3ULW6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc33Q3ULW6 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ccdc33Q3ULW6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.56■□□□□ 0.56
Ccdc33Q3ULW6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.56■□□□□ 0.56
Ccdc33Q3ULW6 Rps4l-201ENSMUST00000071745 943 ntBASIC18.56■□□□□ 0.56
Ccdc33Q3ULW6 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Ccdc33Q3ULW6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.55■□□□□ 0.56
Ccdc33Q3ULW6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Gm11594-201ENSMUST00000122313 162 ntBASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Gm2213-201ENSMUST00000197485 688 ntBASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Ccdc33Q3ULW6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc33Q3ULW6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc33Q3ULW6 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Ccdc33Q3ULW6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc33Q3ULW6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.53■□□□□ 0.56
Ccdc33Q3ULW6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc33Q3ULW6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.53■□□□□ 0.56
Ccdc33Q3ULW6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Ccdc33Q3ULW6 Gm15372-201ENSMUST00000120729 834 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms