Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Gm6576-201ENSMUST00000169678 883 ntBASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Gm18025-201ENSMUST00000221733 862 ntBASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fndc4Q3TR08 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.21□□□□□ -0.13
Fndc4Q3TR08 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Fndc4Q3TR08 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fndc4Q3TR08 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fndc4Q3TR08 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fndc4Q3TR08 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fndc4Q3TR08 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fndc4Q3TR08 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fndc4Q3TR08 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fndc4Q3TR08 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fndc4Q3TR08 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Gm15378-201ENSMUST00000121894 207 ntBASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fndc4Q3TR08 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Gm42545-201ENSMUST00000202755 922 ntBASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fndc4Q3TR08 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.18□□□□□ -0.14
Fndc4Q3TR08 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms