Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Gm11425-201ENSMUST00000119608 498 ntBASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Gm17150-201ENSMUST00000165577 381 ntBASIC8.86□□□□□ -0.99
Ush2AQ2QI47 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Gm9396-201ENSMUST00000076703 567 ntBASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 AY702102-202ENSMUST00000194651 1173 ntBASIC8.86□□□□□ -0.99
Ush2AQ2QI47 AC166349.1-201ENSMUST00000220866 695 ntBASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Gm25287-201ENSMUST00000103846 110 ntBASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Gm22918-201ENSMUST00000103855 110 ntBASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Gm8349-201ENSMUST00000182720 1003 ntBASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Gm9889-202ENSMUST00000206983 1577 ntBASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Gm9257-201ENSMUST00000221254 232 ntBASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Rbfox2-208ENSMUST00000227930 1218 ntBASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ush2AQ2QI47 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Gm6266-201ENSMUST00000203844 806 ntBASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Gm5628-201ENSMUST00000222318 1049 ntBASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 AC126250.1-201ENSMUST00000228343 1768 ntBASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Gm37748-201ENSMUST00000194379 1140 ntBASIC8.85□□□□□ -0.99
Ush2AQ2QI47 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Gm19721-201ENSMUST00000195284 1764 ntBASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Ush2AQ2QI47 Gm13453-201ENSMUST00000118708 357 ntBASIC8.84□□□□□ -0.99
Ush2AQ2QI47 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ush2AQ2QI47 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC8.84□□□□□ -0.99
Ush2AQ2QI47 Ddx41-204ENSMUST00000224765 2199 ntBASIC8.84□□□□□ -0.99
Ush2AQ2QI47 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Ush2AQ2QI47 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Ush2AQ2QI47 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ush2AQ2QI47 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ush2AQ2QI47 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ush2AQ2QI47 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Ush2AQ2QI47 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ush2AQ2QI47 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Ush2AQ2QI47 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Ush2AQ2QI47 Syt7-204ENSMUST00000223586 1344 ntBASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms