Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Npas1P97459 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.99□□□□□ -0.17
Npas1P97459 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Npas1P97459 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Npas1P97459 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npas1P97459 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npas1P97459 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npas1P97459 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.98□□□□□ -0.17
Npas1P97459 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Npas1P97459 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npas1P97459 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.98□□□□□ -0.17
Npas1P97459 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.98□□□□□ -0.17
Npas1P97459 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Npas1P97459 Mir2861-201ENSMUST00000175539 82 ntBASIC13.98□□□□□ -0.17
Npas1P97459 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npas1P97459 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.98□□□□□ -0.17
Npas1P97459 Gm42642-201ENSMUST00000200683 355 ntBASIC13.98□□□□□ -0.17
Npas1P97459 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
Npas1P97459 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npas1P97459 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Npas1P97459 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npas1P97459 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npas1P97459 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Npas1P97459 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.97□□□□□ -0.17
Npas1P97459 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Npas1P97459 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 AV356131-201ENSMUST00000206201 750 ntBASIC13.97□□□□□ -0.17
Npas1P97459 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 Zfp783-201ENSMUST00000095946 670 ntBASIC13.97□□□□□ -0.17
Npas1P97459 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Npas1P97459 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Npas1P97459 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Npas1P97459 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Npas1P97459 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Npas1P97459 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.97□□□□□ -0.17
Npas1P97459 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Npas1P97459 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Npas1P97459 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npas1P97459 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.96□□□□□ -0.17
Npas1P97459 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npas1P97459 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Npas1P97459 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npas1P97459 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npas1P97459 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npas1P97459 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC13.96□□□□□ -0.17
Npas1P97459 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.96□□□□□ -0.17
Npas1P97459 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Npas1P97459 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npas1P97459 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Npas1P97459 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.96□□□□□ -0.18
Npas1P97459 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Npas1P97459 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Npas1P97459 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Npas1P97459 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Npas1P97459 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.95□□□□□ -0.18
Npas1P97459 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.95□□□□□ -0.18
Npas1P97459 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Npas1P97459 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Npas1P97459 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Npas1P97459 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Npas1P97459 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.95□□□□□ -0.18
Npas1P97459 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms