Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lhx1P63006 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.34■□□□□ 0.21
Lhx1P63006 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx1P63006 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lhx1P63006 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.33■□□□□ 0.2
Lhx1P63006 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.33■□□□□ 0.2
Lhx1P63006 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.33■□□□□ 0.2
Lhx1P63006 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Lhx1P63006 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Lhx1P63006 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.33■□□□□ 0.2
Lhx1P63006 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Lhx1P63006 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx1P63006 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.32■□□□□ 0.2
Lhx1P63006 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx1P63006 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.32■□□□□ 0.2
Lhx1P63006 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx1P63006 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx1P63006 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.32■□□□□ 0.2
Lhx1P63006 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx1P63006 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.32■□□□□ 0.2
Lhx1P63006 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Lhx1P63006 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx1P63006 Gm17807-201ENSMUST00000186869 298 ntBASIC16.32■□□□□ 0.2
Lhx1P63006 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx1P63006 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Lhx1P63006 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.32■□□□□ 0.2
Lhx1P63006 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx1P63006 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx1P63006 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx1P63006 Gm10819-201ENSMUST00000099988 561 ntBASIC16.32■□□□□ 0.2
Lhx1P63006 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx1P63006 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx1P63006 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Lhx1P63006 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx1P63006 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.31■□□□□ 0.2
Lhx1P63006 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx1P63006 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx1P63006 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lhx1P63006 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx1P63006 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.31■□□□□ 0.2
Lhx1P63006 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx1P63006 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lhx1P63006 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.31■□□□□ 0.2
Lhx1P63006 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx1P63006 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.31■□□□□ 0.2
Lhx1P63006 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx1P63006 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx1P63006 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx1P63006 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.31■□□□□ 0.2
Lhx1P63006 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Lhx1P63006 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx1P63006 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx1P63006 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx1P63006 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Lhx1P63006 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.31■□□□□ 0.2
Lhx1P63006 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx1P63006 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx1P63006 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx1P63006 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx1P63006 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx1P63006 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Lhx1P63006 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Lhx1P63006 Gm9103-201ENSMUST00000119371 405 ntBASIC16.3■□□□□ 0.2
Lhx1P63006 Gm15794-201ENSMUST00000120182 631 ntBASIC16.3■□□□□ 0.2
Lhx1P63006 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx1P63006 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.3■□□□□ 0.2
Lhx1P63006 Gm27357-201ENSMUST00000183754 135 ntBASIC16.3■□□□□ 0.2
Lhx1P63006 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.3■□□□□ 0.2
Lhx1P63006 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.3■□□□□ 0.2
Lhx1P63006 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx1P63006 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Lhx1P63006 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx1P63006 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx1P63006 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Lhx1P63006 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Lhx1P63006 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms