Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.91□□□□□ -0.5
Rpl39P62892 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Rpl39P62892 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.91□□□□□ -0.5
Rpl39P62892 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rpl39P62892 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rpl39P62892 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.9□□□□□ -0.5
Rpl39P62892 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rpl39P62892 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rpl39P62892 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.9□□□□□ -0.5
Rpl39P62892 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC11.9□□□□□ -0.5
Rpl39P62892 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.9□□□□□ -0.5
Rpl39P62892 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Gm6576-201ENSMUST00000169678 883 ntBASIC11.9□□□□□ -0.5
Rpl39P62892 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Gm42642-201ENSMUST00000200683 355 ntBASIC11.9□□□□□ -0.5
Rpl39P62892 AV356131-201ENSMUST00000206201 750 ntBASIC11.9□□□□□ -0.5
Rpl39P62892 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rpl39P62892 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rpl39P62892 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rpl39P62892 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Rpl39P62892 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rpl39P62892 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Rpl39P62892 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rpl39P62892 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rpl39P62892 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.89□□□□□ -0.51
Rpl39P62892 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rpl39P62892 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC11.89□□□□□ -0.51
Rpl39P62892 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.89□□□□□ -0.51
Rpl39P62892 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Rpl39P62892 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rpl39P62892 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.88□□□□□ -0.51
Rpl39P62892 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl39P62892 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl39P62892 Gm7290-201ENSMUST00000104990 617 ntBASIC11.88□□□□□ -0.51
Rpl39P62892 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl39P62892 Gm12918-201ENSMUST00000120234 636 ntBASIC11.88□□□□□ -0.51
Rpl39P62892 Gm15847-201ENSMUST00000121417 1065 ntBASIC11.88□□□□□ -0.51
Rpl39P62892 Gm15710-201ENSMUST00000121821 636 ntBASIC11.88□□□□□ -0.51
Rpl39P62892 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl39P62892 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl39P62892 Mir6349-201ENSMUST00000184059 97 ntBASIC11.88□□□□□ -0.51
Rpl39P62892 Gm5075-201ENSMUST00000196916 622 ntBASIC11.88□□□□□ -0.51
Rpl39P62892 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
Rpl39P62892 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rpl39P62892 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms