Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NcanP55066 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NcanP55066 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NcanP55066 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.52■□□□□ 0.4
NcanP55066 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NcanP55066 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NcanP55066 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NcanP55066 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NcanP55066 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NcanP55066 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC17.52■□□□□ 0.4
NcanP55066 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NcanP55066 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.52■□□□□ 0.4
NcanP55066 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NcanP55066 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NcanP55066 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NcanP55066 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NcanP55066 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NcanP55066 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NcanP55066 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NcanP55066 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NcanP55066 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NcanP55066 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
NcanP55066 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
NcanP55066 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NcanP55066 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NcanP55066 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NcanP55066 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcanP55066 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcanP55066 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcanP55066 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcanP55066 Gm8655-201ENSMUST00000221159 852 ntBASIC17.51■□□□□ 0.39
NcanP55066 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcanP55066 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcanP55066 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.51■□□□□ 0.39
NcanP55066 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcanP55066 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NcanP55066 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.5■□□□□ 0.39
NcanP55066 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.5■□□□□ 0.39
NcanP55066 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NcanP55066 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NcanP55066 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NcanP55066 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NcanP55066 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NcanP55066 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NcanP55066 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NcanP55066 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NcanP55066 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NcanP55066 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.5■□□□□ 0.39
NcanP55066 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NcanP55066 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.5■□□□□ 0.39
NcanP55066 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.5■□□□□ 0.39
NcanP55066 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NcanP55066 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NcanP55066 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NcanP55066 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.49■□□□□ 0.39
NcanP55066 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
NcanP55066 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.49■□□□□ 0.39
NcanP55066 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.49■□□□□ 0.39
NcanP55066 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.49■□□□□ 0.39
NcanP55066 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NcanP55066 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NcanP55066 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NcanP55066 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NcanP55066 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NcanP55066 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NcanP55066 Gm13616-201ENSMUST00000120600 222 ntBASIC17.48■□□□□ 0.39
NcanP55066 Mir7023-201ENSMUST00000185093 64 ntBASIC17.48■□□□□ 0.39
NcanP55066 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.48■□□□□ 0.39
NcanP55066 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NcanP55066 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NcanP55066 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NcanP55066 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NcanP55066 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.48■□□□□ 0.39
NcanP55066 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NcanP55066 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NcanP55066 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NcanP55066 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.47■□□□□ 0.39
NcanP55066 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms