Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Nub1P54729 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nub1P54729 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nub1P54729 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.89■□□□□ 0.45
Nub1P54729 Gm13836-201ENSMUST00000121159 501 ntBASIC17.89■□□□□ 0.45
Nub1P54729 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nub1P54729 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nub1P54729 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nub1P54729 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nub1P54729 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nub1P54729 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.89■□□□□ 0.45
Nub1P54729 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Nub1P54729 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Nub1P54729 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.88■□□□□ 0.45
Nub1P54729 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nub1P54729 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nub1P54729 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.88■□□□□ 0.45
Nub1P54729 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Nub1P54729 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Gm22697-201ENSMUST00000175194 63 ntBASIC17.88■□□□□ 0.45
Nub1P54729 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.88■□□□□ 0.45
Nub1P54729 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.88■□□□□ 0.45
Nub1P54729 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.88■□□□□ 0.45
Nub1P54729 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Nub1P54729 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.88■□□□□ 0.45
Nub1P54729 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nub1P54729 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nub1P54729 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nub1P54729 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nub1P54729 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.87■□□□□ 0.45
Nub1P54729 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nub1P54729 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nub1P54729 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nub1P54729 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nub1P54729 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nub1P54729 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nub1P54729 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nub1P54729 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Nub1P54729 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.87■□□□□ 0.45
Nub1P54729 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nub1P54729 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nub1P54729 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nub1P54729 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nub1P54729 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nub1P54729 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nub1P54729 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Nub1P54729 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Gm26039-201ENSMUST00000158152 144 ntBASIC17.86■□□□□ 0.45
Nub1P54729 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Nub1P54729 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nub1P54729 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Nub1P54729 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Nub1P54729 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.86■□□□□ 0.45
Nub1P54729 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nub1P54729 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nub1P54729 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nub1P54729 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.86■□□□□ 0.45
Nub1P54729 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nub1P54729 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.85■□□□□ 0.45
Nub1P54729 Gm18101-201ENSMUST00000215769 548 ntBASIC17.85■□□□□ 0.45
Nub1P54729 Gm21559-201ENSMUST00000220638 855 ntBASIC17.85■□□□□ 0.45
Nub1P54729 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms