Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.36■□□□□ 0.69
Cacnb3P54285 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cacnb3P54285 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cacnb3P54285 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.35■□□□□ 0.69
Cacnb3P54285 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC19.35■□□□□ 0.69
Cacnb3P54285 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Cacnb3P54285 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.35■□□□□ 0.69
Cacnb3P54285 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.35■□□□□ 0.69
Cacnb3P54285 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.35■□□□□ 0.69
Cacnb3P54285 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.35■□□□□ 0.69
Cacnb3P54285 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacnb3P54285 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb3P54285 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Cacnb3P54285 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb3P54285 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb3P54285 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb3P54285 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.34■□□□□ 0.69
Cacnb3P54285 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.34■□□□□ 0.69
Cacnb3P54285 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb3P54285 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb3P54285 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb3P54285 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb3P54285 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb3P54285 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb3P54285 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Cacnb3P54285 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacnb3P54285 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacnb3P54285 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.33■□□□□ 0.69
Cacnb3P54285 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacnb3P54285 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacnb3P54285 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cacnb3P54285 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cacnb3P54285 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cacnb3P54285 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cacnb3P54285 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cacnb3P54285 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacnb3P54285 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacnb3P54285 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cacnb3P54285 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.33■□□□□ 0.68
Cacnb3P54285 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cacnb3P54285 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Cacnb3P54285 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cacnb3P54285 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacnb3P54285 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cacnb3P54285 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacnb3P54285 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacnb3P54285 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacnb3P54285 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacnb3P54285 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacnb3P54285 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.32■□□□□ 0.68
Cacnb3P54285 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb3P54285 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb3P54285 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb3P54285 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Cacnb3P54285 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb3P54285 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.32■□□□□ 0.68
Cacnb3P54285 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.32■□□□□ 0.68
Cacnb3P54285 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.32■□□□□ 0.68
Cacnb3P54285 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb3P54285 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.32■□□□□ 0.68
Cacnb3P54285 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb3P54285 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cacnb3P54285 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb3P54285 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb3P54285 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cacnb3P54285 Gm9889-202ENSMUST00000206983 1577 ntBASIC19.32■□□□□ 0.68
Cacnb3P54285 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacnb3P54285 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacnb3P54285 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacnb3P54285 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacnb3P54285 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacnb3P54285 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacnb3P54285 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cacnb3P54285 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacnb3P54285 Gm25745-201ENSMUST00000174945 133 ntBASIC19.31■□□□□ 0.68
Cacnb3P54285 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Cacnb3P54285 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.31■□□□□ 0.68
Cacnb3P54285 Gm8969-201ENSMUST00000199694 526 ntBASIC19.31■□□□□ 0.68
Cacnb3P54285 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms