Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Sox18P43680 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.91■□□□□ 0.14
Sox18P43680 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.91■□□□□ 0.14
Sox18P43680 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.91■□□□□ 0.14
Sox18P43680 Gm27867-201ENSMUST00000184778 125 ntBASIC15.91■□□□□ 0.14
Sox18P43680 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.91■□□□□ 0.14
Sox18P43680 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.91■□□□□ 0.14
Sox18P43680 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Sox18P43680 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sox18P43680 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sox18P43680 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Sox18P43680 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sox18P43680 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Gm15165-201ENSMUST00000118140 502 ntBASIC15.9■□□□□ 0.14
Sox18P43680 Gm12260-201ENSMUST00000122447 411 ntBASIC15.9■□□□□ 0.14
Sox18P43680 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.9■□□□□ 0.14
Sox18P43680 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.9■□□□□ 0.14
Sox18P43680 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
Sox18P43680 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.9■□□□□ 0.14
Sox18P43680 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Sox18P43680 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.9■□□□□ 0.14
Sox18P43680 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Sox18P43680 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.9■□□□□ 0.14
Sox18P43680 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Sox18P43680 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sox18P43680 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Sox18P43680 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
Sox18P43680 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Gm14822-201ENSMUST00000122247 291 ntBASIC15.89■□□□□ 0.13
Sox18P43680 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC15.89■□□□□ 0.13
Sox18P43680 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.89■□□□□ 0.13
Sox18P43680 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.89■□□□□ 0.13
Sox18P43680 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sox18P43680 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.89■□□□□ 0.13
Sox18P43680 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Sox18P43680 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sox18P43680 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox18P43680 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sox18P43680 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sox18P43680 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox18P43680 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox18P43680 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox18P43680 Gm14494-201ENSMUST00000118786 435 ntBASIC15.88■□□□□ 0.13
Sox18P43680 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox18P43680 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.88■□□□□ 0.13
Sox18P43680 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.88■□□□□ 0.13
Sox18P43680 Gm5186-201ENSMUST00000218781 920 ntBASIC15.88■□□□□ 0.13
Sox18P43680 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.88■□□□□ 0.13
Sox18P43680 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox18P43680 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Sox18P43680 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox18P43680 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox18P43680 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox18P43680 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox18P43680 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sox18P43680 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms