Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cdh4P39038 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cdh4P39038 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.92■□□□□ 0.14
Cdh4P39038 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.92■□□□□ 0.14
Cdh4P39038 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.92■□□□□ 0.14
Cdh4P39038 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.92■□□□□ 0.14
Cdh4P39038 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cdh4P39038 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.92■□□□□ 0.14
Cdh4P39038 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cdh4P39038 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Cdh4P39038 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Cdh4P39038 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.92■□□□□ 0.14
Cdh4P39038 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cdh4P39038 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.91■□□□□ 0.14
Cdh4P39038 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.91■□□□□ 0.14
Cdh4P39038 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.91■□□□□ 0.14
Cdh4P39038 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Cdh4P39038 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cdh4P39038 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.91■□□□□ 0.14
Cdh4P39038 Gm11355-201ENSMUST00000121120 306 ntBASIC15.91■□□□□ 0.14
Cdh4P39038 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.91■□□□□ 0.14
Cdh4P39038 Gm23634-201ENSMUST00000175071 91 ntBASIC15.91■□□□□ 0.14
Cdh4P39038 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cdh4P39038 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Cdh4P39038 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cdh4P39038 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdh4P39038 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Cdh4P39038 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh4P39038 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.9■□□□□ 0.14
Cdh4P39038 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cdh4P39038 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cdh4P39038 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh4P39038 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.9■□□□□ 0.14
Cdh4P39038 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Cdh4P39038 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cdh4P39038 Phf7-203ENSMUST00000226565 1971 ntBASIC15.89■□□□□ 0.13
Cdh4P39038 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Cdh4P39038 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Cdh4P39038 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Cdh4P39038 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.89■□□□□ 0.13
Cdh4P39038 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdh4P39038 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms