Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HmgclP38060 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HmgclP38060 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
HmgclP38060 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HmgclP38060 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.39■□□□□ 0.21
HmgclP38060 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HmgclP38060 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.39■□□□□ 0.21
HmgclP38060 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.39■□□□□ 0.21
HmgclP38060 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.39■□□□□ 0.21
HmgclP38060 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HmgclP38060 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HmgclP38060 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
HmgclP38060 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HmgclP38060 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.38■□□□□ 0.21
HmgclP38060 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HmgclP38060 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Gm29707-201ENSMUST00000196325 491 ntBASIC16.38■□□□□ 0.21
HmgclP38060 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HmgclP38060 Gm18421-201ENSMUST00000204122 625 ntBASIC16.38■□□□□ 0.21
HmgclP38060 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.38■□□□□ 0.21
HmgclP38060 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
HmgclP38060 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
HmgclP38060 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HmgclP38060 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HmgclP38060 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
HmgclP38060 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
HmgclP38060 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HmgclP38060 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
HmgclP38060 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HmgclP38060 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
HmgclP38060 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.36■□□□□ 0.21
HmgclP38060 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.36■□□□□ 0.21
HmgclP38060 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HmgclP38060 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HmgclP38060 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms