Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RxrbP28704 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RxrbP28704 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RxrbP28704 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
RxrbP28704 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.74■□□□□ 0.27
RxrbP28704 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.74■□□□□ 0.27
RxrbP28704 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RxrbP28704 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RxrbP28704 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RxrbP28704 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RxrbP28704 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RxrbP28704 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RxrbP28704 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RxrbP28704 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.74■□□□□ 0.27
RxrbP28704 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RxrbP28704 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RxrbP28704 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
RxrbP28704 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.73■□□□□ 0.27
RxrbP28704 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RxrbP28704 Prob1-201ENSMUST00000097619 3021 ntBASIC16.73■□□□□ 0.27
RxrbP28704 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RxrbP28704 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RxrbP28704 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.73■□□□□ 0.27
RxrbP28704 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RxrbP28704 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.73■□□□□ 0.27
RxrbP28704 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RxrbP28704 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RxrbP28704 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.73■□□□□ 0.27
RxrbP28704 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
RxrbP28704 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RxrbP28704 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RxrbP28704 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RxrbP28704 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.72■□□□□ 0.27
RxrbP28704 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.72■□□□□ 0.27
RxrbP28704 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RxrbP28704 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.71■□□□□ 0.27
RxrbP28704 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.71■□□□□ 0.27
RxrbP28704 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RxrbP28704 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.71■□□□□ 0.26
RxrbP28704 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.71■□□□□ 0.26
RxrbP28704 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RxrbP28704 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RxrbP28704 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RxrbP28704 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RxrbP28704 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RxrbP28704 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RxrbP28704 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RxrbP28704 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RxrbP28704 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RxrbP28704 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RxrbP28704 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RxrbP28704 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.7■□□□□ 0.26
RxrbP28704 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms