Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.89□□□□□ -0.19
Col8a2P25318 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col8a2P25318 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col8a2P25318 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col8a2P25318 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col8a2P25318 Gm9103-201ENSMUST00000119371 405 ntBASIC13.88□□□□□ -0.19
Col8a2P25318 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.88□□□□□ -0.19
Col8a2P25318 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.88□□□□□ -0.19
Col8a2P25318 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.88□□□□□ -0.19
Col8a2P25318 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.88□□□□□ -0.19
Col8a2P25318 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col8a2P25318 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col8a2P25318 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Col8a2P25318 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Col8a2P25318 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.87□□□□□ -0.19
Col8a2P25318 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.87□□□□□ -0.19
Col8a2P25318 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.87□□□□□ -0.19
Col8a2P25318 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Gm28033-201ENSMUST00000184224 96 ntBASIC13.87□□□□□ -0.19
Col8a2P25318 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.87□□□□□ -0.19
Col8a2P25318 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.87□□□□□ -0.19
Col8a2P25318 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.87□□□□□ -0.19
Col8a2P25318 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col8a2P25318 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.87□□□□□ -0.19
Col8a2P25318 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col8a2P25318 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 Gm27742-201ENSMUST00000184667 60 ntBASIC13.86□□□□□ -0.19
Col8a2P25318 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.86□□□□□ -0.19
Col8a2P25318 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.86□□□□□ -0.19
Col8a2P25318 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col8a2P25318 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col8a2P25318 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Col8a2P25318 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Col8a2P25318 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col8a2P25318 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col8a2P25318 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col8a2P25318 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.85□□□□□ -0.19
Col8a2P25318 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col8a2P25318 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col8a2P25318 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col8a2P25318 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col8a2P25318 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col8a2P25318 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col8a2P25318 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.85□□□□□ -0.19
Col8a2P25318 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col8a2P25318 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col8a2P25318 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms