Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp6P0C0A3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Chmp6P0C0A3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Chmp6P0C0A3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Chmp6P0C0A3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Chmp6P0C0A3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Gm7370-201ENSMUST00000219471 767 ntBASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Chmp6P0C0A3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Gm13474-201ENSMUST00000122466 815 ntBASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Chmp6P0C0A3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Chmp6P0C0A3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Chmp6P0C0A3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp6P0C0A3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp6P0C0A3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp6P0C0A3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Chmp6P0C0A3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp6P0C0A3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Chmp6P0C0A3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Chmp6P0C0A3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp6P0C0A3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp6P0C0A3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp6P0C0A3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Chmp6P0C0A3 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms