Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hoxc9P09633 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC21.54■■□□□ 1.04
Hoxc9P09633 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC21.54■■□□□ 1.04
Hoxc9P09633 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hoxc9P09633 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.54■■□□□ 1.04
Hoxc9P09633 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Hoxc9P09633 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Hoxc9P09633 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.53■■□□□ 1.04
Hoxc9P09633 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 Gm4535-201ENSMUST00000182274 558 ntBASIC21.53■■□□□ 1.04
Hoxc9P09633 Gm8349-201ENSMUST00000182720 1003 ntBASIC21.53■■□□□ 1.04
Hoxc9P09633 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC21.53■■□□□ 1.04
Hoxc9P09633 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 Gm10355-201ENSMUST00000097146 517 ntBASIC21.53■■□□□ 1.04
Hoxc9P09633 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Hoxc9P09633 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc9P09633 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc9P09633 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc9P09633 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc9P09633 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc9P09633 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc9P09633 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc9P09633 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc9P09633 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC21.52■■□□□ 1.04
Hoxc9P09633 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc9P09633 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc9P09633 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Hoxc9P09633 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc9P09633 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc9P09633 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc9P09633 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc9P09633 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Hoxc9P09633 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc9P09633 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC21.51■■□□□ 1.03
Hoxc9P09633 Gm37935-201ENSMUST00000192012 982 ntBASIC21.51■■□□□ 1.03
Hoxc9P09633 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC21.51■■□□□ 1.03
Hoxc9P09633 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC21.51■■□□□ 1.03
Hoxc9P09633 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Hoxc9P09633 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc9P09633 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc9P09633 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc9P09633 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc9P09633 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc9P09633 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc9P09633 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc9P09633 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc9P09633 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc9P09633 Gm7230-201ENSMUST00000173026 815 ntBASIC21.5■■□□□ 1.03
Hoxc9P09633 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Hoxc9P09633 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC21.5■■□□□ 1.03
Hoxc9P09633 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC21.5■■□□□ 1.03
Hoxc9P09633 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc9P09633 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC21.5■■□□□ 1.03
Hoxc9P09633 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc9P09633 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc9P09633 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc9P09633 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc9P09633 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Hoxc9P09633 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc9P09633 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc9P09633 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.49■■□□□ 1.03
Hoxc9P09633 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxc9P09633 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxc9P09633 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC21.49■■□□□ 1.03
Hoxc9P09633 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC21.49■■□□□ 1.03
Hoxc9P09633 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC21.49■■□□□ 1.03
Hoxc9P09633 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxc9P09633 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxc9P09633 Gm36967-201ENSMUST00000193814 266 ntBASIC21.49■■□□□ 1.03
Hoxc9P09633 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC21.49■■□□□ 1.03
Hoxc9P09633 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21.49■■□□□ 1.03
Hoxc9P09633 Gm5364-201ENSMUST00000216789 889 ntBASIC21.49■■□□□ 1.03
Hoxc9P09633 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxc9P09633 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxc9P09633 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxc9P09633 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxc9P09633 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc9P09633 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc9P09633 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Hoxc9P09633 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.48■■□□□ 1.03
Hoxc9P09633 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Hoxc9P09633 AC154527.4-201ENSMUST00000224364 1667 ntBASIC21.48■■□□□ 1.03
Hoxc9P09633 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Hoxc9P09633 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc9P09633 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC21.48■■□□□ 1.03
Hoxc9P09633 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Hoxc9P09633 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc9P09633 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms