Protein–RNA interactions for Protein: P07350

Ifna6, Interferon alpha-6, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna6P07350 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ifna6P07350 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ifna6P07350 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ifna6P07350 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ifna6P07350 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ifna6P07350 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ifna6P07350 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ifna6P07350 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Ifna6P07350 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ifna6P07350 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.68□□□□□ -0.22
Ifna6P07350 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Ifna6P07350 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ifna6P07350 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
Ifna6P07350 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Gm10849-201ENSMUST00000100397 618 ntBASIC13.67□□□□□ -0.22
Ifna6P07350 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.67□□□□□ -0.22
Ifna6P07350 Gm37025-201ENSMUST00000195159 829 ntBASIC13.67□□□□□ -0.22
Ifna6P07350 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC13.67□□□□□ -0.22
Ifna6P07350 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Ifna6P07350 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ifna6P07350 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.67□□□□□ -0.22
Ifna6P07350 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ifna6P07350 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.66□□□□□ -0.22
Ifna6P07350 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.66□□□□□ -0.22
Ifna6P07350 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.66□□□□□ -0.22
Ifna6P07350 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.66□□□□□ -0.22
Ifna6P07350 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ifna6P07350 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Ifna6P07350 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Ifna6P07350 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ifna6P07350 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.65□□□□□ -0.22
Ifna6P07350 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.65□□□□□ -0.22
Ifna6P07350 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Ifna6P07350 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ifna6P07350 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.65□□□□□ -0.22
Ifna6P07350 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ifna6P07350 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Ifna6P07350 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC13.65□□□□□ -0.22
Ifna6P07350 Gm24841-201ENSMUST00000158676 357 ntBASIC13.65□□□□□ -0.22
Ifna6P07350 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ifna6P07350 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.65□□□□□ -0.22
Ifna6P07350 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ifna6P07350 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ifna6P07350 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.65□□□□□ -0.22
Ifna6P07350 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Ifna6P07350 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ifna6P07350 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms