Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
P04214 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
P04214 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.39■□□□□ 0.37
P04214 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04214 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04214 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.39■□□□□ 0.37
P04214 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04214 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04214 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
P04214 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
P04214 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
P04214 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04214 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
P04214 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.39■□□□□ 0.37
P04214 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
P04214 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.38■□□□□ 0.37
P04214 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04214 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04214 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04214 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04214 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04214 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
P04214 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P04214 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.38■□□□□ 0.37
P04214 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P04214 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04214 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04214 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
P04214 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04214 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.38■□□□□ 0.37
P04214 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.38■□□□□ 0.37
P04214 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.38■□□□□ 0.37
P04214 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04214 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
P04214 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
P04214 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04214 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04214 Gm7222-201ENSMUST00000117512 906 ntBASIC17.37■□□□□ 0.37
P04214 Gm25911-201ENSMUST00000157621 56 ntBASIC17.37■□□□□ 0.37
P04214 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.37■□□□□ 0.37
P04214 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.37■□□□□ 0.37
P04214 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.37■□□□□ 0.37
P04214 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.37■□□□□ 0.37
P04214 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04214 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04214 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
P04214 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
P04214 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
P04214 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
P04214 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04214 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.36■□□□□ 0.37
P04214 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.36■□□□□ 0.37
P04214 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P04214 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
P04214 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.36■□□□□ 0.37
P04214 Gm9172-201ENSMUST00000212092 954 ntBASIC17.36■□□□□ 0.37
P04214 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.36■□□□□ 0.37
P04214 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P04214 Gm10175-201ENSMUST00000086013 645 ntBASIC17.36■□□□□ 0.37
P04214 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04214 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04214 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04214 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04214 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
P04214 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.36■□□□□ 0.37
P04214 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04214 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04214 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04214 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04214 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04214 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P04214 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.35■□□□□ 0.37
P04214 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
P04214 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.35■□□□□ 0.37
P04214 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
P04214 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.35■□□□□ 0.37
P04214 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
P04214 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
P04214 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
P04214 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P04214 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04214 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
P04214 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
P04214 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms