Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Rarb-207ENSMUST00000225921 2756 ntBASIC17.09■□□□□ 0.33
P01878 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01878 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01878 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
P01878 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
P01878 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.08■□□□□ 0.33
P01878 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
P01878 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
P01878 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01878 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01878 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.08■□□□□ 0.32
P01878 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01878 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01878 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.08■□□□□ 0.32
P01878 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.08■□□□□ 0.32
P01878 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01878 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01878 Gm36967-201ENSMUST00000193814 266 ntBASIC17.08■□□□□ 0.32
P01878 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.08■□□□□ 0.32
P01878 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
P01878 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.08■□□□□ 0.32
P01878 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.08■□□□□ 0.32
P01878 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01878 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01878 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
P01878 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
P01878 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.07■□□□□ 0.32
P01878 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
P01878 Gm1401-201ENSMUST00000122048 772 ntBASIC17.07■□□□□ 0.32
P01878 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.07■□□□□ 0.32
P01878 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.07■□□□□ 0.32
P01878 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.07■□□□□ 0.32
P01878 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.07■□□□□ 0.32
P01878 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.07■□□□□ 0.32
P01878 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P01878 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.07■□□□□ 0.32
P01878 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.06■□□□□ 0.32
P01878 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01878 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.06■□□□□ 0.32
P01878 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01878 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P01878 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P01878 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01878 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
P01878 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P01878 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P01878 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.06■□□□□ 0.32
P01878 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01878 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P01878 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.06■□□□□ 0.32
P01878 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.05■□□□□ 0.32
P01878 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.05■□□□□ 0.32
P01878 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
P01878 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.05■□□□□ 0.32
P01878 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
P01878 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.05■□□□□ 0.32
P01878 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.05■□□□□ 0.32
P01878 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
P01878 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
P01878 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.05■□□□□ 0.32
P01878 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.05■□□□□ 0.32
P01878 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
P01878 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01878 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
P01878 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P01878 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
P01878 Gm25990-201ENSMUST00000102440 86 ntBASIC17.04■□□□□ 0.32
P01878 Gm13418-201ENSMUST00000119097 944 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms