Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Abcd4O89016 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Abcd4O89016 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abcd4O89016 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Abcd4O89016 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.05■□□□□ -0
Abcd4O89016 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.05■□□□□ -0
Abcd4O89016 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.05■□□□□ -0
Abcd4O89016 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.05■□□□□ -0
Abcd4O89016 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Abcd4O89016 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Abcd4O89016 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Abcd4O89016 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.05■□□□□ -0
Abcd4O89016 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Abcd4O89016 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abcd4O89016 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.04■□□□□ -0
Abcd4O89016 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.04■□□□□ -0
Abcd4O89016 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abcd4O89016 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.04■□□□□ -0
Abcd4O89016 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abcd4O89016 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abcd4O89016 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abcd4O89016 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abcd4O89016 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abcd4O89016 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Abcd4O89016 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.04■□□□□ -0
Abcd4O89016 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.04■□□□□ -0
Abcd4O89016 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.04■□□□□ -0
Abcd4O89016 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Abcd4O89016 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.03■□□□□ -0
Abcd4O89016 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Abcd4O89016 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.03■□□□□ -0
Abcd4O89016 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.03■□□□□ -0
Abcd4O89016 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Abcd4O89016 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.03■□□□□ -0
Abcd4O89016 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Abcd4O89016 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd4O89016 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd4O89016 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd4O89016 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd4O89016 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd4O89016 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd4O89016 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.02■□□□□ -0
Abcd4O89016 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd4O89016 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd4O89016 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Abcd4O89016 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.02■□□□□ -0
Abcd4O89016 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Abcd4O89016 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Abcd4O89016 Gm9103-201ENSMUST00000119371 405 ntBASIC15.02■□□□□ -0
Abcd4O89016 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.02■□□□□ -0
Abcd4O89016 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Abcd4O89016 Gm17808-201ENSMUST00000200859 894 ntBASIC15.02■□□□□ -0
Abcd4O89016 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Abcd4O89016 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.02■□□□□ -0
Abcd4O89016 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abcd4O89016 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Abcd4O89016 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abcd4O89016 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Abcd4O89016 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abcd4O89016 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abcd4O89016 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abcd4O89016 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Abcd4O89016 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd4O89016 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd4O89016 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd4O89016 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd4O89016 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Abcd4O89016 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms