Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Hdac3O88895 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.88□□□□□ -0.03
Hdac3O88895 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.88□□□□□ -0.03
Hdac3O88895 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Hdac3O88895 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Hdac3O88895 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.88□□□□□ -0.03
Hdac3O88895 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Hdac3O88895 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.87□□□□□ -0.03
Hdac3O88895 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Hdac3O88895 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Hdac3O88895 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.87□□□□□ -0.03
Hdac3O88895 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.87□□□□□ -0.03
Hdac3O88895 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.87□□□□□ -0.03
Hdac3O88895 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.87□□□□□ -0.03
Hdac3O88895 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Hdac3O88895 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.87□□□□□ -0.03
Hdac3O88895 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.87□□□□□ -0.03
Hdac3O88895 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Hdac3O88895 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Hdac3O88895 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.86□□□□□ -0.03
Hdac3O88895 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hdac3O88895 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.86□□□□□ -0.03
Hdac3O88895 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.86□□□□□ -0.03
Hdac3O88895 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Hdac3O88895 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.86□□□□□ -0.03
Hdac3O88895 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC14.86□□□□□ -0.03
Hdac3O88895 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Hdac3O88895 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Hdac3O88895 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.86□□□□□ -0.03
Hdac3O88895 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Hdac3O88895 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.85□□□□□ -0.03
Hdac3O88895 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.85□□□□□ -0.03
Hdac3O88895 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.85□□□□□ -0.03
Hdac3O88895 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.85□□□□□ -0.03
Hdac3O88895 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hdac3O88895 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hdac3O88895 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hdac3O88895 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms