Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.93□□□□□ -0.02
Cops3O88543 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Cops3O88543 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Cops3O88543 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Cops3O88543 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cops3O88543 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
Cops3O88543 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.92□□□□□ -0.02
Cops3O88543 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.92□□□□□ -0.02
Cops3O88543 Gm37856-201ENSMUST00000191634 999 ntBASIC14.92□□□□□ -0.02
Cops3O88543 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Cops3O88543 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.92□□□□□ -0.02
Cops3O88543 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Cops3O88543 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Cops3O88543 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.91□□□□□ -0.02
Cops3O88543 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cops3O88543 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Cops3O88543 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops3O88543 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.9□□□□□ -0.02
Cops3O88543 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops3O88543 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cops3O88543 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops3O88543 Gm12527-201ENSMUST00000117967 564 ntBASIC14.9□□□□□ -0.02
Cops3O88543 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.9□□□□□ -0.02
Cops3O88543 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.9□□□□□ -0.02
Cops3O88543 Gm37025-201ENSMUST00000195159 829 ntBASIC14.9□□□□□ -0.02
Cops3O88543 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops3O88543 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops3O88543 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops3O88543 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Cops3O88543 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops3O88543 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cops3O88543 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.9□□□□□ -0.02
Cops3O88543 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cops3O88543 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cops3O88543 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cops3O88543 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cops3O88543 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cops3O88543 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cops3O88543 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.89□□□□□ -0.03
Cops3O88543 Trmt13-210ENSMUST00000198454 880 ntBASIC14.89□□□□□ -0.03
Cops3O88543 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cops3O88543 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms