Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Cacna1hO88427 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC16.15■□□□□ 0.18
Cacna1hO88427 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Cacna1hO88427 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.15■□□□□ 0.18
Cacna1hO88427 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cacna1hO88427 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cacna1hO88427 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Cacna1hO88427 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.14■□□□□ 0.17
Cacna1hO88427 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.14■□□□□ 0.17
Cacna1hO88427 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.14■□□□□ 0.17
Cacna1hO88427 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 Gm2423-201ENSMUST00000074863 733 ntBASIC16.14■□□□□ 0.17
Cacna1hO88427 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cacna1hO88427 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.14■□□□□ 0.17
Cacna1hO88427 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cacna1hO88427 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cacna1hO88427 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Cacna1hO88427 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.13■□□□□ 0.17
Cacna1hO88427 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.13■□□□□ 0.17
Cacna1hO88427 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.13■□□□□ 0.17
Cacna1hO88427 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Gm25857-201ENSMUST00000082788 129 ntBASIC16.13■□□□□ 0.17
Cacna1hO88427 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cacna1hO88427 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cacna1hO88427 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1hO88427 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1hO88427 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1hO88427 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cacna1hO88427 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
Cacna1hO88427 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.12■□□□□ 0.17
Cacna1hO88427 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.12■□□□□ 0.17
Cacna1hO88427 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1hO88427 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1hO88427 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1hO88427 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1hO88427 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cacna1hO88427 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.12■□□□□ 0.17
Cacna1hO88427 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1hO88427 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cacna1hO88427 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.12■□□□□ 0.17
Cacna1hO88427 Gm44492-201ENSMUST00000197012 141 ntBASIC16.12■□□□□ 0.17
Cacna1hO88427 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cacna1hO88427 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Cacna1hO88427 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.11■□□□□ 0.17
Cacna1hO88427 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.11■□□□□ 0.17
Cacna1hO88427 Gm22175-201ENSMUST00000175007 78 ntBASIC16.11■□□□□ 0.17
Cacna1hO88427 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.11■□□□□ 0.17
Cacna1hO88427 Gm45747-201ENSMUST00000212203 999 ntBASIC16.11■□□□□ 0.17
Cacna1hO88427 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.11■□□□□ 0.17
Cacna1hO88427 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cacna1hO88427 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Cacna1hO88427 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms