Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stra6O70491 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Stra6O70491 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Stra6O70491 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stra6O70491 Gm44454-201ENSMUST00000198541 138 ntBASIC18.33■□□□□ 0.52
Stra6O70491 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.33■□□□□ 0.52
Stra6O70491 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.33■□□□□ 0.52
Stra6O70491 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Stra6O70491 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Stra6O70491 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Stra6O70491 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stra6O70491 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stra6O70491 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Stra6O70491 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.32■□□□□ 0.52
Stra6O70491 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Stra6O70491 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
Stra6O70491 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
Stra6O70491 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stra6O70491 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stra6O70491 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Stra6O70491 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stra6O70491 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stra6O70491 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Stra6O70491 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Stra6O70491 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stra6O70491 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stra6O70491 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stra6O70491 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Stra6O70491 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stra6O70491 Gm15165-201ENSMUST00000118140 502 ntBASIC18.31■□□□□ 0.52
Stra6O70491 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Stra6O70491 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stra6O70491 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Stra6O70491 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.31■□□□□ 0.52
Stra6O70491 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stra6O70491 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stra6O70491 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stra6O70491 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Stra6O70491 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.31■□□□□ 0.52
Stra6O70491 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Stra6O70491 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.3■□□□□ 0.52
Stra6O70491 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.3■□□□□ 0.52
Stra6O70491 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.3■□□□□ 0.52
Stra6O70491 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.3■□□□□ 0.52
Stra6O70491 Gm6296-201ENSMUST00000222599 943 ntBASIC18.3■□□□□ 0.52
Stra6O70491 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Stra6O70491 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.3■□□□□ 0.52
Stra6O70491 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Stra6O70491 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Stra6O70491 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.3■□□□□ 0.52
Stra6O70491 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.29■□□□□ 0.52
Stra6O70491 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stra6O70491 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Stra6O70491 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.29■□□□□ 0.52
Stra6O70491 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stra6O70491 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stra6O70491 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Stra6O70491 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stra6O70491 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Stra6O70491 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Stra6O70491 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC18.29■□□□□ 0.52
Stra6O70491 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stra6O70491 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Stra6O70491 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stra6O70491 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stra6O70491 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.29■□□□□ 0.52
Stra6O70491 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stra6O70491 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Stra6O70491 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Stra6O70491 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.29■□□□□ 0.52
Stra6O70491 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Stra6O70491 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Stra6O70491 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stra6O70491 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Stra6O70491 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stra6O70491 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Stra6O70491 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Stra6O70491 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Stra6O70491 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stra6O70491 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.28■□□□□ 0.52
Stra6O70491 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Stra6O70491 AW822252-206ENSMUST00000208904 237 ntBASIC18.28■□□□□ 0.52
Stra6O70491 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Stra6O70491 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stra6O70491 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Stra6O70491 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms