Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Pdlim3O70209 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Pdlim3O70209 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Pdlim3O70209 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pdlim3O70209 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pdlim3O70209 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim3O70209 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim3O70209 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim3O70209 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pdlim3O70209 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim3O70209 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
Pdlim3O70209 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim3O70209 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim3O70209 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim3O70209 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim3O70209 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pdlim3O70209 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim3O70209 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim3O70209 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim3O70209 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pdlim3O70209 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pdlim3O70209 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Pdlim3O70209 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Gm37179-201ENSMUST00000194862 823 ntBASIC15.1■□□□□ 0.01
Pdlim3O70209 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.1■□□□□ 0.01
Pdlim3O70209 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pdlim3O70209 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pdlim3O70209 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim3O70209 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim3O70209 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pdlim3O70209 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim3O70209 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim3O70209 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pdlim3O70209 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim3O70209 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pdlim3O70209 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim3O70209 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.09■□□□□ 0.01
Pdlim3O70209 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim3O70209 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.09■□□□□ 0.01
Pdlim3O70209 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pdlim3O70209 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.09■□□□□ 0.01
Pdlim3O70209 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pdlim3O70209 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Pdlim3O70209 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.09■□□□□ 0.01
Pdlim3O70209 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pdlim3O70209 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.09■□□□□ 0.01
Pdlim3O70209 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim3O70209 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim3O70209 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim3O70209 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.08■□□□□ 0.01
Pdlim3O70209 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim3O70209 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim3O70209 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim3O70209 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pdlim3O70209 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pdlim3O70209 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pdlim3O70209 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Pdlim3O70209 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pdlim3O70209 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms