Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pja1O55176 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pja1O55176 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.58■□□□□ 0.41
Pja1O55176 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pja1O55176 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Pja1O55176 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pja1O55176 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Pja1O55176 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pja1O55176 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pja1O55176 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pja1O55176 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.58■□□□□ 0.4
Pja1O55176 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.58■□□□□ 0.4
Pja1O55176 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pja1O55176 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.58■□□□□ 0.4
Pja1O55176 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pja1O55176 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pja1O55176 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Pja1O55176 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pja1O55176 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pja1O55176 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Pja1O55176 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.58■□□□□ 0.4
Pja1O55176 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pja1O55176 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pja1O55176 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pja1O55176 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pja1O55176 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pja1O55176 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pja1O55176 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pja1O55176 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.57■□□□□ 0.4
Pja1O55176 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.57■□□□□ 0.4
Pja1O55176 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.57■□□□□ 0.4
Pja1O55176 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.57■□□□□ 0.4
Pja1O55176 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pja1O55176 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pja1O55176 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pja1O55176 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pja1O55176 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pja1O55176 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pja1O55176 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pja1O55176 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.57■□□□□ 0.4
Pja1O55176 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pja1O55176 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pja1O55176 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Pja1O55176 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.56■□□□□ 0.4
Pja1O55176 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.56■□□□□ 0.4
Pja1O55176 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.56■□□□□ 0.4
Pja1O55176 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pja1O55176 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pja1O55176 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pja1O55176 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pja1O55176 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pja1O55176 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Pja1O55176 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pja1O55176 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pja1O55176 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.55■□□□□ 0.4
Pja1O55176 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pja1O55176 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.55■□□□□ 0.4
Pja1O55176 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pja1O55176 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pja1O55176 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pja1O55176 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pja1O55176 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pja1O55176 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.55■□□□□ 0.4
Pja1O55176 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Pja1O55176 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.55■□□□□ 0.4
Pja1O55176 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Pja1O55176 Gm7791-201ENSMUST00000219066 539 ntBASIC17.54■□□□□ 0.4
Pja1O55176 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Pja1O55176 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pja1O55176 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pja1O55176 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pja1O55176 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms