Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Gm13401-201ENSMUST00000117074 291 ntBASIC13.19□□□□□ -0.3
Pde6dO55057 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Pde6dO55057 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.19□□□□□ -0.3
Pde6dO55057 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.19□□□□□ -0.3
Pde6dO55057 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Pde6dO55057 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.19□□□□□ -0.3
Pde6dO55057 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pde6dO55057 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pde6dO55057 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pde6dO55057 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.18□□□□□ -0.3
Pde6dO55057 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pde6dO55057 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.18□□□□□ -0.3
Pde6dO55057 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pde6dO55057 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Pde6dO55057 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.18□□□□□ -0.3
Pde6dO55057 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.18□□□□□ -0.3
Pde6dO55057 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.18□□□□□ -0.3
Pde6dO55057 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pde6dO55057 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.17□□□□□ -0.3
Pde6dO55057 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde6dO55057 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pde6dO55057 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pde6dO55057 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde6dO55057 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.17□□□□□ -0.3
Pde6dO55057 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pde6dO55057 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Pde6dO55057 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pde6dO55057 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde6dO55057 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.17□□□□□ -0.3
Pde6dO55057 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pde6dO55057 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pde6dO55057 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.16□□□□□ -0.3
Pde6dO55057 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6dO55057 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6dO55057 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6dO55057 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6dO55057 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Pde6dO55057 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6dO55057 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6dO55057 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6dO55057 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6dO55057 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6dO55057 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6dO55057 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6dO55057 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Pde6dO55057 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pde6dO55057 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pde6dO55057 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.16□□□□□ -0.3
Pde6dO55057 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6dO55057 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pde6dO55057 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.16□□□□□ -0.3
Pde6dO55057 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms