Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cxcl13O55038 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Gm12895-201ENSMUST00000122214 226 ntBASIC14.06□□□□□ -0.16
Cxcl13O55038 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cxcl13O55038 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Cxcl13O55038 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cxcl13O55038 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.05□□□□□ -0.16
Cxcl13O55038 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cxcl13O55038 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.05□□□□□ -0.16
Cxcl13O55038 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.05□□□□□ -0.16
Cxcl13O55038 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.05□□□□□ -0.16
Cxcl13O55038 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.05□□□□□ -0.16
Cxcl13O55038 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.05□□□□□ -0.16
Cxcl13O55038 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Cxcl13O55038 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cxcl13O55038 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Cxcl13O55038 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.05□□□□□ -0.16
Cxcl13O55038 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cxcl13O55038 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cxcl13O55038 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Cxcl13O55038 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Cxcl13O55038 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.04□□□□□ -0.16
Cxcl13O55038 Gm44430-201ENSMUST00000203376 995 ntBASIC14.04□□□□□ -0.16
Cxcl13O55038 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cxcl13O55038 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cxcl13O55038 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Cxcl13O55038 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cxcl13O55038 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl13O55038 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.03□□□□□ -0.16
Cxcl13O55038 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.03□□□□□ -0.16
Cxcl13O55038 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.03□□□□□ -0.16
Cxcl13O55038 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.03□□□□□ -0.16
Cxcl13O55038 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.03□□□□□ -0.16
Cxcl13O55038 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cxcl13O55038 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl13O55038 Gm34391-201ENSMUST00000203706 907 ntBASIC14.03□□□□□ -0.16
Cxcl13O55038 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.03□□□□□ -0.16
Cxcl13O55038 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl13O55038 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl13O55038 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl13O55038 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl13O55038 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl13O55038 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cxcl13O55038 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl13O55038 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cxcl13O55038 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl13O55038 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cxcl13O55038 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Cxcl13O55038 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cxcl13O55038 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Cxcl13O55038 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcl13O55038 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcl13O55038 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cxcl13O55038 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcl13O55038 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cxcl13O55038 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.02□□□□□ -0.16
Cxcl13O55038 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms