Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prom1O54990 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prom1O54990 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prom1O54990 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prom1O54990 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.3■□□□□ 0.52
Prom1O54990 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prom1O54990 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prom1O54990 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prom1O54990 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prom1O54990 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.3■□□□□ 0.52
Prom1O54990 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prom1O54990 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Prom1O54990 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prom1O54990 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.3■□□□□ 0.52
Prom1O54990 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.3■□□□□ 0.52
Prom1O54990 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prom1O54990 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prom1O54990 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prom1O54990 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Prom1O54990 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.29■□□□□ 0.52
Prom1O54990 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prom1O54990 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prom1O54990 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prom1O54990 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prom1O54990 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prom1O54990 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prom1O54990 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Prom1O54990 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.29■□□□□ 0.52
Prom1O54990 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.29■□□□□ 0.52
Prom1O54990 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.29■□□□□ 0.52
Prom1O54990 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prom1O54990 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.29■□□□□ 0.52
Prom1O54990 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.29■□□□□ 0.52
Prom1O54990 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.29■□□□□ 0.52
Prom1O54990 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.29■□□□□ 0.52
Prom1O54990 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Prom1O54990 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.29■□□□□ 0.52
Prom1O54990 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prom1O54990 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prom1O54990 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Prom1O54990 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prom1O54990 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prom1O54990 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prom1O54990 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prom1O54990 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prom1O54990 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Prom1O54990 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prom1O54990 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prom1O54990 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prom1O54990 Gm7506-201ENSMUST00000207758 815 ntBASIC18.28■□□□□ 0.52
Prom1O54990 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prom1O54990 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prom1O54990 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Prom1O54990 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.28■□□□□ 0.52
Prom1O54990 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.28■□□□□ 0.52
Prom1O54990 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prom1O54990 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.27■□□□□ 0.52
Prom1O54990 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prom1O54990 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Prom1O54990 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Prom1O54990 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prom1O54990 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.27■□□□□ 0.52
Prom1O54990 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Prom1O54990 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.27■□□□□ 0.52
Prom1O54990 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prom1O54990 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Prom1O54990 Gm25745-201ENSMUST00000174945 133 ntBASIC18.27■□□□□ 0.52
Prom1O54990 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
Prom1O54990 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC18.27■□□□□ 0.52
Prom1O54990 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.27■□□□□ 0.52
Prom1O54990 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Prom1O54990 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prom1O54990 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Prom1O54990 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Prom1O54990 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prom1O54990 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prom1O54990 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Prom1O54990 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prom1O54990 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.26■□□□□ 0.51
Prom1O54990 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.26■□□□□ 0.51
Prom1O54990 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.26■□□□□ 0.51
Prom1O54990 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prom1O54990 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prom1O54990 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms