Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Kcnu1O54982 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.72■□□□□ 0.43
Kcnu1O54982 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.72■□□□□ 0.43
Kcnu1O54982 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Kcnu1O54982 Gm11539-201ENSMUST00000119837 557 ntBASIC17.72■□□□□ 0.43
Kcnu1O54982 Gm13436-201ENSMUST00000120418 567 ntBASIC17.72■□□□□ 0.43
Kcnu1O54982 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.72■□□□□ 0.43
Kcnu1O54982 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Kcnu1O54982 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Kcnu1O54982 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Kcnu1O54982 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.71■□□□□ 0.43
Kcnu1O54982 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
Kcnu1O54982 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Kcnu1O54982 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Kcnu1O54982 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcnu1O54982 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Kcnu1O54982 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcnu1O54982 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcnu1O54982 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Kcnu1O54982 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Kcnu1O54982 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcnu1O54982 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.7■□□□□ 0.42
Kcnu1O54982 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcnu1O54982 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.7■□□□□ 0.42
Kcnu1O54982 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcnu1O54982 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Kcnu1O54982 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcnu1O54982 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Kcnu1O54982 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Kcnu1O54982 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Kcnu1O54982 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kcnu1O54982 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcnu1O54982 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.69■□□□□ 0.42
Kcnu1O54982 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcnu1O54982 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcnu1O54982 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcnu1O54982 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcnu1O54982 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.69■□□□□ 0.42
Kcnu1O54982 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcnu1O54982 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcnu1O54982 Gm10566-201ENSMUST00000086739 996 ntBASIC17.69■□□□□ 0.42
Kcnu1O54982 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Kcnu1O54982 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Kcnu1O54982 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcnu1O54982 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Kcnu1O54982 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcnu1O54982 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Kcnu1O54982 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcnu1O54982 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Kcnu1O54982 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Kcnu1O54982 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcnu1O54982 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kcnu1O54982 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Kcnu1O54982 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kcnu1O54982 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcnu1O54982 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcnu1O54982 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcnu1O54982 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kcnu1O54982 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcnu1O54982 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Kcnu1O54982 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcnu1O54982 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.68■□□□□ 0.42
Kcnu1O54982 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.68■□□□□ 0.42
Kcnu1O54982 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Kcnu1O54982 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Kcnu1O54982 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.68■□□□□ 0.42
Kcnu1O54982 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
Kcnu1O54982 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Kcnu1O54982 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms