Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Rnf13O54965 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rnf13O54965 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rnf13O54965 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnf13O54965 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rnf13O54965 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf13O54965 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rnf13O54965 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.11■□□□□ 0.01
Rnf13O54965 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf13O54965 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rnf13O54965 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC15.11■□□□□ 0.01
Rnf13O54965 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.11■□□□□ 0.01
Rnf13O54965 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.11■□□□□ 0.01
Rnf13O54965 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.11■□□□□ 0.01
Rnf13O54965 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf13O54965 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf13O54965 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf13O54965 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rnf13O54965 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnf13O54965 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.11■□□□□ 0.01
Rnf13O54965 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnf13O54965 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.1■□□□□ 0.01
Rnf13O54965 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Rnf13O54965 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rnf13O54965 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rnf13O54965 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.1■□□□□ 0.01
Rnf13O54965 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rnf13O54965 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnf13O54965 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rnf13O54965 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rnf13O54965 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rnf13O54965 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rnf13O54965 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.09■□□□□ 0.01
Rnf13O54965 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.09■□□□□ 0.01
Rnf13O54965 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rnf13O54965 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf13O54965 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf13O54965 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf13O54965 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf13O54965 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf13O54965 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rnf13O54965 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.08■□□□□ 0.01
Rnf13O54965 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rnf13O54965 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf13O54965 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Rnf13O54965 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms