Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.8■□□□□ 0.28
ChkaO54804 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.8■□□□□ 0.28
ChkaO54804 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.8■□□□□ 0.28
ChkaO54804 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ChkaO54804 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ChkaO54804 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
ChkaO54804 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ChkaO54804 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ChkaO54804 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ChkaO54804 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ChkaO54804 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
ChkaO54804 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ChkaO54804 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
ChkaO54804 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
ChkaO54804 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ChkaO54804 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.79■□□□□ 0.28
ChkaO54804 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ChkaO54804 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ChkaO54804 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ChkaO54804 Gm10812-201ENSMUST00000099864 546 ntBASIC16.79■□□□□ 0.28
ChkaO54804 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ChkaO54804 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ChkaO54804 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ChkaO54804 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.79■□□□□ 0.28
ChkaO54804 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ChkaO54804 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ChkaO54804 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.79■□□□□ 0.28
ChkaO54804 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ChkaO54804 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ChkaO54804 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ChkaO54804 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ChkaO54804 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ChkaO54804 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
ChkaO54804 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ChkaO54804 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ChkaO54804 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.78■□□□□ 0.28
ChkaO54804 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ChkaO54804 Mir5122-201ENSMUST00000175004 89 ntBASIC16.78■□□□□ 0.28
ChkaO54804 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.78■□□□□ 0.28
ChkaO54804 Gm21814-202ENSMUST00000203277 873 ntBASIC16.78■□□□□ 0.28
ChkaO54804 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.78■□□□□ 0.28
ChkaO54804 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ChkaO54804 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ChkaO54804 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ChkaO54804 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ChkaO54804 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ChkaO54804 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.78■□□□□ 0.28
ChkaO54804 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ChkaO54804 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ChkaO54804 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ChkaO54804 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
ChkaO54804 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ChkaO54804 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ChkaO54804 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ChkaO54804 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ChkaO54804 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.77■□□□□ 0.28
ChkaO54804 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ChkaO54804 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ChkaO54804 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ChkaO54804 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ChkaO54804 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
ChkaO54804 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ChkaO54804 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ChkaO54804 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ChkaO54804 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ChkaO54804 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ChkaO54804 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ChkaO54804 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ChkaO54804 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ChkaO54804 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ChkaO54804 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
ChkaO54804 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.76■□□□□ 0.27
ChkaO54804 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.76■□□□□ 0.27
ChkaO54804 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.76■□□□□ 0.27
ChkaO54804 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ChkaO54804 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms