Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Abca4O35600 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abca4O35600 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abca4O35600 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abca4O35600 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Abca4O35600 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.57■□□□□ 0.08
Abca4O35600 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abca4O35600 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Abca4O35600 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abca4O35600 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abca4O35600 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Abca4O35600 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Abca4O35600 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Abca4O35600 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.57■□□□□ 0.08
Abca4O35600 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.57■□□□□ 0.08
Abca4O35600 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abca4O35600 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abca4O35600 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Abca4O35600 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Abca4O35600 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.56■□□□□ 0.08
Abca4O35600 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.56■□□□□ 0.08
Abca4O35600 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.56■□□□□ 0.08
Abca4O35600 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.56■□□□□ 0.08
Abca4O35600 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.56■□□□□ 0.08
Abca4O35600 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.56■□□□□ 0.08
Abca4O35600 Gm8825-201ENSMUST00000182565 998 ntBASIC15.56■□□□□ 0.08
Abca4O35600 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.56■□□□□ 0.08
Abca4O35600 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Abca4O35600 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Abca4O35600 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Abca4O35600 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.55■□□□□ 0.08
Abca4O35600 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 Gm27306-201ENSMUST00000183970 107 ntBASIC15.55■□□□□ 0.08
Abca4O35600 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.55■□□□□ 0.08
Abca4O35600 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 Rassf8-202ENSMUST00000058538 1131 ntBASIC15.55■□□□□ 0.08
Abca4O35600 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Abca4O35600 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.55■□□□□ 0.08
Abca4O35600 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.55■□□□□ 0.08
Abca4O35600 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.55■□□□□ 0.08
Abca4O35600 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Abca4O35600 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Abca4O35600 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.55■□□□□ 0.08
Abca4O35600 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Abca4O35600 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Abca4O35600 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca4O35600 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca4O35600 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca4O35600 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.54■□□□□ 0.08
Abca4O35600 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.54■□□□□ 0.08
Abca4O35600 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca4O35600 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca4O35600 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca4O35600 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.54■□□□□ 0.08
Abca4O35600 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca4O35600 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca4O35600 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca4O35600 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca4O35600 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.54■□□□□ 0.08
Abca4O35600 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Abca4O35600 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.54■□□□□ 0.08
Abca4O35600 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca4O35600 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Abca4O35600 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Abca4O35600 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Abca4O35600 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
Abca4O35600 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.54■□□□□ 0.08
Abca4O35600 Gm22175-201ENSMUST00000175007 78 ntBASIC15.54■□□□□ 0.08
Abca4O35600 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Abca4O35600 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Abca4O35600 Gm45612-201ENSMUST00000211320 160 ntBASIC15.54■□□□□ 0.08
Abca4O35600 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.53■□□□□ 0.08
Abca4O35600 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Abca4O35600 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Abca4O35600 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms